Global Topology Analysis of the Escherichia coli Inner Membrane Proteome
Daniel O. Daley, Mikaela Rapp, Erik Granseth, Karin Melén, David Drew and Gunnar von Heijne
Science (2005) 308, 1321-1323

Supplementary material

• TMHMM predictions with fixed C-terminus is available here
• TMHMM predictions with fixed C-terminus and thumbnails of the prediction results is available here (more graphics so it takes longer to load (~10 Mb))
• Excel-sheet with the results from the study is here, and tab-separated version is here. These are updated 2005-08-15 and now include gene names and b-numbers. The gene names and b-numbers were added by Monica Riley from the Marine Biological Laboratory, Massachusettes, USA.
• Flat file with all sequences used for the study is here

Experimentally Constrained Topology Models for 51,208 Bacterial Inner Membrane Proteins
Erik Granseth, Daniel O. Daley, Mikaela Rapp, Karin Melén and Gunnar von Heijne
J. Mol. Biol. (2005) 352,489-494

Supplementary material

• 51,208 detailed topology predictions can be found here (6.6Mb)
• The 51,208 sequences that we used for the predictions is available here (13Mb)
• Supplementary material 1 in tab-separated plain text is here
• Supplementary material 2 in plain text is available here
• Supplementary material 3 in plain text is available here (zipped)