Query proteins with experimentally determined C-teminal location. Proteins are identifed by their PDB or Uniprot identifier, or by the protein name used in  (Daley et al., 2005). "Moller" designates the Möller database (Möller et al., 2000). "MPTOPO" designates the MPTOPO database (Jayasinghe et al., 2001). "TMPDB" designates the TMPDB database (Ikeda et al. 2003), "Own" designates topologies extracted from the recent literature by us (see J. Nilsson, B. Persson & G. von Heijne "Comparative analysis of amino acid distributions in integral membrane proteins from 107 genomes" (2005), PROTEINS: Structure, Function, and Bioinformatics, in press).

Daley, D. O., Rapp, M., Granseth, E., Melén, K., Drew, D. & von Heijne, G. (2005). Global topology analysis of the Escherichia coli inner membrane proteome. Science 308, 1321-1323.

Ikeda M, Arai M, Okuno T, Shimizu T. TMPDB: a database of experimentally-characterized transmembrane topologies. Nucleic Acids Res 2003; 31: 406-409.

Jayasinghe S, Hristova K, White SH. Energetics, stability, and prediction of transmembrane helices. J Mol Biol 2001; 312: 927-934.

Möller S, Kriventseva EV, Apweiler R. A collection of well characterised integral membrane proteins. Bioinformatics 2000; 16: 1159-1160.


Protein and C-terminal location

100_1JB0_Nterm_out_TM_2	in
101_1JB0_Nterm_out_TM_1	in
102_1JB0_Nterm_out_TM_1	out
103_1JB0_Nterm_out_TM_2	out
104_1JB0_Nterm_in_TM_3	out
105_1JB0_Nterm_out_TM_1	in
106_1JB0_Nterm_in_TM_1	out
112__Nterm_in_TM_1	out
114_1KPL_Nterm_in_TM_17	in
115_1H2S_Nterm_in_TM_2	in
122_1LNQ_Nterm_in_TM_3	in
123_1ORQ_Nterm_in_TM_9	out
131_1P7B_Nterm_in_TM_4	in
132_1PF4_Nterm_in_TM_6	in
146_1UM3_Nterm_out_TM_4	out
147_1UM3_Nterm_out_TM_3	in
148_1UM3_Nterm_in_TM_1	out
149_1UM3_Nterm_out_TM_1	in
150_1UM3_Nterm_in_TM_1	out
151_1UM3_Nterm_in_TM_1	out
152_1UM3_Nterm_in_TM_1	out
153_1UM3_Nterm_in_TM_1	out
165_1RHZ,1RH5_Nterm_in_TM_10	in
166_1RHZ,1RH5_Nterm_in_TM_1	out
167_1RHZ,1RH5_Nterm_in_TM_1	out
177_1QLE_Nterm_in_TM_1	out
179_1EYS_Nterm_out_TM_1	in
180_1EYS_Nterm_in_TM_5	out
181_1EYS_Nterm_in_TM_5	out
33_1PRC_Nterm_out_TM_1	in
52_1KZU_Nterm_in_TM_1	out
53_1KZU_Nterm_in_TM_1	out
54_1LGH_Nterm_in_TM_1	out
55_1LGH_Nterm_in_TM_1	out
63_2RCR,4RCR_Nterm_out_TM_1	in
85_1EHK_Nterm_in_TM_1	out
91__Nterm_in_TM_7	out
93_1EHK_Nterm_in_TM_1	out
A25102_RHOVI_MPTOPO3D	out
A26161_HALN1_MPTOPO3D	in
ADTA_RICPR_MOLLER_B	in
ALKB_PSEOL_MOLLER_C	in
B25102_RHOVI_MPTOPO3D	out
BLAR_BACLI_TMPDB1D	out
BOFA_BACSU_MOLLER_B	out
CITN_KLEPN_OWN	out
CYB_RHOSH_MOLLER_C	in
DCTA_RHIME_TMPDB1D	in
DTPT_LACLA_MOLLER_B	in
E70821_MYCTU_MPTOPO3D	in
FIXL_RHIME_TMPDB1D	in
HMCT_HELPY_OWN	in
HOXN_ALCEU_TMPDB1D	out
IMMA_CITFR_MOLLER_C	in
LCRD_YERPE_TMPDB1D	in
LEP4_ERWCA_MOLLER_C	out
MEXB_PSEAE_OWN	in
MMEBMT_SALTI_MPTOPO1D	in
MMEBQT_SALTI_MPTOPO1D	in
MNTB_SYNY3_MOLLER_C	in
NUOH_RHOCA_OWN	out
O07837_RHOCA_OWN	in
O34653_BACSU_OWN	in
OBPC2N_PARDE_MPTOPO3D	out
OPPB_SALTY_MOLLER_C	in
OPPC_SALTY_MOLLER_C	in
OXLT_OXAFO_OWN	in
PILS_PSEAE_OWN	in
PRRB_RHOSH_MOLLER_B	in
PSAA_SYNEN_TMPDB3D	out
PSAA_SYNY3_TMPDB1D	out
PSAB_SYNEN_TMPDB3D	out
PSAB_SYNY3_TMPDB1D	out
PSAL_SYNEN_TMPDB3D	in
PUCC_RHOCA_MOLLER_B	in
Q56577_VIBAL_TMPDB1D	out
Q97QX7_STRPN_TMPDB1D	in
Q9EYX5_SALTY_OWN	in
Q9HV19_PSEAE_OWN	in
QACA_STAAU_MOLLER_C	in
QACC_STAAU_TMPDB1D	in
RAHSB_HALSA_MPTOPO3D	in
RNFA_RHOCA_TMPDB1D	out
S03807_PARDE_MPTOPO3D	out
S03809_PARDE_MPTOPO3D	in
S10164_WOLSU_MPTOPO3D	out
S55300_NATPH_MPTOPO3D	in
S60172_STRLI_MPTOPO3D	in
T52481_THEAQ_MPTOPO3D	out
TCR2_BACSU_TMPDB1D	in
VIRA_AGRT9_TMPDB1D	in
WNRFLS_RHOSH_MPTOPO3D	out
WNRFMS_RHOSH_MPTOPO3D	out
YSCU_YERPE_TMPDB1D	in
Aer	in
AfuB	in
AgaC	in
AgaW	in
AmpG	in
AmtB	in
AppB	in
AqpZ	in
AraE	in
AraJ	in
AroP	in
ArtM	in
ArtQ	in
AtpI	in
BasS	in
Bcr	in
BglF	in
BrnQ	in
BtuC	in
CcmB	in
CcmC	in
CcmF	in
ChbC	in
Cmr	in
CodB	in
CorA	in
CpxA	in
CreC	in
CreD	in
CybB	in
CycA	in
CydA	in
CydB	in
CyoB	in
CysW	in
CysZ	in
DcuS	in
DedA	in
DgoT	in
DppB	in
DppC	in
DsbB	in
EmrB	in
EmrD	in
EnvZ	in
ExbB	in
ExuT	in
FdoI	in
FecC	in
FecD	in
FeoB	in
FepD	in
FepE	in
FepG	in
FlhB	in
Fsr	in
FtsW	in
FtsX	in
FucP	in
FxsA	in
GabP	in
GlnP	in
GlpG	in
GlpT	in
GltK	in
GltP	in
HdeD	in
HemY	in
HisM	in
HisQ	in
HrsA	in
HtpX	in
HyaA	in
HyaC	in
HybB	in
HyfE	in
Kch	in
KdgT	in
KdpD	in
KefC	in
LacY	in
Lgt	in
LivH	in
LspA	in
LysP	in
MalF	in
MalG	in
MdlB	in
MdoH	in
MelB	in
MglC	in
ModB	in
MotA	in
MrdB	in
MreD	in
MscL	in
NanT	in
NarK	in
NarU	in
NarV	in
NhaA	in
NikB	in
NikC	in
NorM	in
NuoJ	in
NuoK	in
NupG	in
OppB	in
OppC	in
PanF	in
PgpB	in
PgsA	in
PheP	in
PhoR	in
PntB	in
PnuC	in
PotB	in
PotE	in
PotH	in
ProP	in
ProW	in
PstC	in
PtsG	in
RarD	in
Rbn	in
RbsC	in
RfaL	in
RfbX	in
Rfe	in
RseC	in
RstB	in
SapB	in
SapC	in
SbmA	in
SecF	in
SecY	in
SohB	in
SrlA	in
Tar	in
TatC	in
TehA	in
TolQ	in
TreB	in
TrkG	in
UgpA	in
UhpC	in
UhpT	in
UidB	in
WcaJ	in
Wzc	in
WzxC	in
WzxE	in
WzzE	in
XapB	in
XasA	in
XylE	in
XylH	in
YaaH	in
YabM	in
YadH	in
YadS	in
YaeE	in
YafU	in
YagU	in
YaiY	in
YajR	in
YbaL	in
YbaN	in
YbaT	in
YbbJ	in
YbbM	in
YbbW	in
YbbY	in
YbcI	in
YbcZ	in
YbdA	in
YbgH	in
YbgR	in
YbhL	in
YbhN	in
YbhQ	in
YbhR	in
YbhS	in
YbiF	in
YbjG	in
YbjJ	in
YbjM	in
YbjO	in
YcaD	in
YcaM	in
YcbM	in
YccA	in
YccC	in
YccF	in
YccS	in
YcdG	in
YcdP	in
YcdQ	in
YcdT	in
YcdZ	in
YceJ	in
YceL	in
YcfT	in
YcfZ	in
YchM	in
YciB	in
YciC	in
YcjF	in
YcjO	in
YcjP	in
YdaN	in
YdcO	in
YdcU	in
YdcV	in
YdcZ	in
YddA	in
YddG	in
YddQ	in
YddR	in
YdeA	in
YdeD	in
YdeY	in
YdeZ	in
YdfJ	in
YdgF	in
YdgG	in
YdgK	in
YdgQ	in
YdgR	in
YdhC	in
YdhP	in
YdiK	in
YdiM	in
YdiN	in
YdjE	in
YdjZ	in
YeaI	in
YeaN	in
YebE	in
YebS	in
YecS	in
YedA	in
YedE	in
YedI	in
YedR	in
YedV	in
YedZ	in
YeeA	in
YeeE	in
YegB	in
YegO	in
YegT	in
YehU	in
YehW	in
YehY	in
YeiU	in
YejE	in
YfaV	in
YfbF	in
YfbJ	in
YfbV	in
YfcJ	in
YfdC	in
YfdG	in
YfdH	in
YfeV	in
YfeZ	in
YfgF	in
YfhK	in
YfiN	in
YfjD	in
YgaP	in
YgaZ	in
YgcS	in
YgcZ	in
YgdD	in
YgdQ	in
YgeD	in
YgfO	in
YgfU	in
YggB	in
YghB	in
YgiH	in
YgiY	in
YgjI	in
YgjT	in
YgjU	in
YgjV	in
YhaH	in
YhaI	in
YhaU	in
YhbE	in
YhcP	in
YhdY	in
YhfC	in
YhhJ	in
YhhQ	in
YhhT	in
YhiM	in
YhiP	in
YhiV	in
YhjD	in
YhjE	in
YhjN	in
YhjX	in
YiaA	in
YiaB	in
YiaH	in
YiaM	in
YiaW	in
YicG	in
YicJ	in
YicK	in
YicL	in
YicM	in
YidY	in
YieI	in
YieO	in
YifK	in
YigG	in
YigJ	in
YihG	in
YihN	in
YihP	in
YiiP	in
YijD	in
YijE	in
YjbA	in
YjcH	in
YjdE	in
YjdF	in
YjdL	in
YjeH	in
YjeM	in
YjfF	in
YjgN	in
YjgP	in
YjgQ	in
YjiO	in
YjiY	in
YjjL	in
YkgB	in
YlaC	in
YliC	in
YmfA	in
YnaI	in
YnbA	in
YnfJ	in
YnfM	in
YnjC	in
YnjF	in
YnjI	in
YoaE	in
YobD	in
YodB	in
YohD	in
YpdG	in
YphA	in
YqcE	in
YqiJ	in
YqiK	in
YqjA	in
YqjE	in
YqjF	in
YrfF	in
YtfF	in
YtfL	in
YtfT	in
ZntA	in
ZnuB	in
AmpE	out
ArsB	out
AtoE	out
CcmH	out
CdsA	out
ChaA	out
CrcB	out
CvpA	out
CyoC	out
CyoD	out
CyoE	out
DcuA	out
DcuB	out
DgkA	out
DipZ	out
DmsC	out
DsdX	out
EmrE	out
FrdC	out
FrdD	out
GltS	out
GlvC	out
GntP	out
GntU	out
GspF	out
GspO	out
HycD	out
HyfC	out
LepB	out
ManZ	out
MarC	out
MenA	out
Mtr	out
NuoH	out
NuoL	out
NuoN	out
NupC	out
PgpA	out
PitA	out
PppA	out
RhaT	out
SdaC	out
SdhC	out
SecG	out
SrlE	out
SugE	out
TnaB	out
TyrP	out
UbiA	out
UspB	out
YabI	out
YbhI	out
YbiP	out
YbiR	out
YccM	out
YchQ	out
YdgC	out
YdgE	out
YdgI	out
YdgL	out
YdjM	out
YebN	out
YebZ	out
YecN	out
YeiH	out
YeiJ	out
YeiM	out
YejM	out
YfbW	out
YfcA	out
YfeP	out
YfiK	out
YgbE	out
YgbN	out
YggA	out
YghK	out
YghQ	out
YgiZ	out
YgjE	out
YhaO	out
YhbX	out
YhcL	out
YhgN	out
YhjV	out
YhjW	out
YiaD	out
YiaV	out
YibH	out
YicO	out
YidG	out
YidH	out
YieG	out
YjcD	out
YjeO	out
YjfL	out
YjiG	out
YjjP	out
YmcD	out
YnfA	out
YohC	out
YohJ	out
YohK	out
YohM	out
YpjD	out
YqaA	out
YqeG	out
YqfA	out
YrbE	out
YrbG	out
AcrB	in
AlsC	in
CstA	in
FdnI	in
NarI	in
NirC	in
PntA	in
ProY	in
PutP	in
Tap	in
YciS	in
YeeF	in
YeeR	in
YejB	in
YhhS	in
YidK	in
YjcG	in
YpdA	in
CyoA	out
HyfB	out
IdnT	out
NuoM	out
YidI	out
FtsK	in
HflB	in
ManY	in
MtlA	in
YadQ	in
GlpF	in
AtpB	in
AtpE	out
Gcd	out
MraY	out
SdhD	out
SecE	out